
Load in unsampled example
unsampled_example.Rd
Load in unsampled example
Examples
unsampled_example()
#> $asvtable
#> # A tibble: 7 × 236
#> SampleID TACGGAGGGTGCAAGCGTTA…¹ TACGTAGGTGGCAAGCGTTA…² TACGTAGGTGACAAGCGTTG…³
#> <chr> <int> <int> <int>
#> 1 5080-MS-… 17 0 0
#> 2 5080-MS-… 0 0 0
#> 3 5080-MS-… 0 35300 0
#> 4 5080-MS-… 0 21760 0
#> 5 5348-MS-… 93 18304 52803
#> 6 5348-MS-… 119019 3593 0
#> 7 5348-MS-… 0 13951 0
#> # ℹ abbreviated names:
#> # ¹TACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTCTGTCAAGTCGGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATTCGAAACTGGCAGGCTAGAGTCTTGTAGAGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGGTGGCGAAGGCGGCCCCCTGGACAAAGACTGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAGG,
#> # ²TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTAGGCGGTTTTTTAAGTCTGATGTGAAAGCCCACGGCTCAACCGTGGAGGGTCATTGGAAACTGGAAAACTTGAGTGCAGAAGAGGAAAGTGGAATTCCATGTGTAGCGGTGAAATGCGCAGAGATATGGAGGAACACCAGTGGCGAAGGCGACTTTCTGGTCTGTAACTGACGCTGATGTGCGAAAGCGTGGGGATCAAACAGG,
#> # ³TACGTAGGTGACAAGCGTTGTCCGGATTTATTGGGCGTAAAGGGAGCGCAGGCGGTCTGTTTAGTCTAATGTGAAAGCCCACGGCTTAACCGTGGAACGGCATTGGAAACTGACAGACTTGAATGTAGAAGAGGAAAATGGAATTCCAAGTGTAGCGGTGGAATGCGTAGATATTTGGAGGAACACCAGTGGCGAAGGCGATTTTCTGGTCTAACATTGACGCTGAGGCTCGAAAGCGTGGGGAGCGAACAGG
#> # ℹ 232 more variables:
#> # TACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGGGCTCGTAGGTGGTTTGTCGCGTCGTCTGTGAAATTCTGGGGCTTAACTCCGGGCGTGCAGGCGATACGGGCATAACTTGAGTGCTGTAGGGGTAACTGGAATTCCTGGTGTAGCGGTGAAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGGCAGGTTACTGGGCAGTTACTGACGCTGAGGAGCGAAAGCATGGGTAGCGAACAGG <int>,
#> # TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTAGATAAGTCTGAAGTTAAAGGCTGTGGCTTAACCATAGTACGCTTTGGAAACTGTTTAACTTGAGTGCAAGAGGGGAGAGTGGAATTCCATGTGTAGCGGTGAAATGCGTAGATATATGGAGGAACACCGGTGGCGAAAGCGGCTCTCTGGCTTGTAACTGACGCTGAGGCTCGAAAGCGTGGGGAGCAAACAGG <int>, …
#>
#> $metadata
#> # A tibble: 7 × 7
#> SampleID LabID SampleType host_age host_sex Host_disease neg
#> <chr> <chr> <chr> <int> <chr> <chr> <lgl>
#> 1 5080-MS-1_328-GATCTACG-… part… Homo sapi… 33 female healthy FALSE
#> 2 5080-MS-1_339-ACTCACTG-… part… Homo sapi… 25 male healthy FALSE
#> 3 5348-MS-1_162-ACGTGCGC-… part… Homo sapi… 27 male COVID-19 FALSE
#> 4 5348-MS-1_297-GTCTGCTA-… part… Homo sapi… 26 female COVID-19 FALSE
#> 5 5080-MS-1_307-ATAGTACC-… CTRL… negative … NA NA NA TRUE
#> 6 5080-MS-1_313-GACATAGT-… CTRL… negative … NA NA NA TRUE
#> 7 5348-MS-1_381-TGCTCGTA-… CTRL… positive … NA NA NA FALSE
#>